BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C09SP1|AL427293
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1584 1860 0.0
>3x_Contig1584
Length = 9710
Score = 1860 bits (932), Expect = 0.0
Identities = 971/988 (98%), Gaps = 2/988 (0%)
Strand = Plus / Plus
Query: 1 atctgtttaggctaaactgtawcaaagggtgaagcctatttttatttggtgatgaaagcg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5891 atctgtttaggctaaactgtatcaaagggtgaagcctatttttatttggtgatgaaagcg 5950
Query: 61 tcctaaaaaacatgacaagaatgatggttccactctcaattggtcgtttttaacggtttc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5951 tcctaaaaaacatgacaagaatgatggttccactctcaattggtc-tttttaacggtttc 6009
Query: 121 agtttcttccttcacgacagaaactgaaacttcagcagagtgattccattcttgcaattc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6010 agtttcttccttcacgacaggaactgaaacttcagcagagtgattccattcttgcaattc 6069
Query: 181 tttttggtgttcacgttcaatagcgaaacgaacagcttccaaaacattttcacaaatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 tttttggtgttcacgttcaatagcgaaacgaacagcttccaaaacattttcacaaatctg 6129
Query: 241 ctttggcttgtatttaggagtggtaccttcttggtagacaccagtcttgacaaggataga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6130 ctttggcttgtatttaggagtggtaccttcttggtagacaccagtcttgacaaggataga 6189
Query: 301 gtaccaagaagagtcatgcgagtaagcaaatctgatatctgattctggagtatcaccaac 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6190 gtaccaagaagagtcatgcgagttagcaaatctgatatctgattctggagtatcaccaac 6249
Query: 361 gaagtacacagtagatgactgggggaagatccaaaagtaccgaggaagtcttgttgataa 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6250 gaagtacacagtagatg-ctgggggaagatccaaaagtaccgaggaagtcttgttgataa 6308
Query: 421 cgataccttcgtcatcttcatcatcttccaaatcgtcatcgtcctcggttgaagtgagah 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6309 cgataccttcgtcatcttcatcatcttccaaatcgtcatcgtcctcggttgaagtgagat 6368
Query: 481 cggtttcttgatcagtttctgaatcaggtccgaatggcgaatcgctggactgttgtwgtw 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6369 cggtttcttgatcagtttctgaatcaggtccgaatggcgaatcgctggactgttgttgtt 6428
Query: 541 gctgtaaagttttctgctgcttttggaaagamatacctaattgttcaacatgtwcttcca 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 6429 gctgtaaagttttctgctgcttttggaaagaaatacctaattgttcaacatgttcttcca 6488
Query: 601 atgtatttttacgccattwactcaacactttttctgcgaatctaaaggtaccacgttgag 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6489 atgtatttttacgccatttactcaacactttttctgcgaatctaaaggtaccacgttgag 6548
Query: 661 gtttaccgaaacgtgtcacttgtaattctttaccagtatgctcctggtacaatgcagcva 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6549 gtttaccgaaacgtgtcacttgtaattctttaccagtatgctcctggtacaatgcagcaa 6608
Query: 721 tggacacttgtaaagcacccataccataacgactcaaaccataatctgtggcccaaacga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6609 tggacacttgtaaagcacccataccataacgactcaaaccataatctgtggcccaaacga 6668
Query: 781 aatccgagtaagcgaagtacaaacctggaccctcgtctgcggtctcggaaacggtaccca 840
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6669 aatccgagtgagcgaagtacaaacctggaccctcgtctgcggtctcggaaacggtaccca 6728
Query: 841 tgacaccgtactwggacaaaagtaattctaagatgatctgctggtcagcggcccaatttc 900
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6729 tgacaccgttcttggacaaaagtaattctaagatgatctgctggtcagcggcccaatttc 6788
Query: 901 tgggatcagcgaagacaagaatggcatcaatgctaatctttgagaaatctgcatcgacgg 960
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6789 tggaatcagcgaagacaagaatggcatcaatgctaatctttgagaaatctgcatcgacgg 6848
Query: 961 ctgcwtctttctcctcgtcactgagtgt 988
|||| |||||||||||||||||||||||
Sbjct: 6849 ctgcttctttctcctcgtcactgagtgt 6876
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7193
Number of Sequences: 1807
Number of extensions: 7193
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)